Articles

Keywords: Cubozoa; Feeding rates; Jellyfish; Prey; Survival

The box jellyfish Carybdea marsupialis has proliferated in some areas of the north-western Mediterranean Sea since July 2008. As for many species, controlled experimentation in the laboratory is needed to improve our knowledge about C. marsupialis, with the ultimate goal of extrapolating the knowledge gained to the marine environment. The aims of this study were to identify the optimal conditions (i.e. aquarium design, environmental parameters and prey type) for the growth and maintenance of this cubomedusa in the laboratory and, additionally, to quantify the feeding rates of the juveniles of this species. We were able to maintain healthy medusae for 140 days. During this time they reached the subadult condition (fact corroborated by observing the gonadal tissue), growing from 2 to 15 mm in diagonal bell width from June to November 2010, respectively. We observed a progressive shift in their preferred dietary composition as the individuals grew. The medusae fed on Artemia salina nauplii along the entire development. Other, larger, prey types (e.g. Mysis sp., Acartia granii copepods and adult Artemia salina) were progressively ingested at the same time as they increased their umbrella size. We also describe the clearance rates, ingestion rates, prey selectivity and digestion times of juvenile C. marsupialis on natural zooplankton and on the copepod Acartia grani. Growth and mortality rates were also calculated.

We assessed the relationship between zooplankton metabolism (respiration and inorganic N and P excretion) and \"in situ\" temperature through a grid of stations representing a range of natural temperature variation during the ATOS-Arctic cruise (July 2007). The objective was to explore not only the direct effects of temperature on zooplankton carbon respiratory losses (hereafter CR) and NH4-N and PO4-P excretion rates (hereafter NE and PE, respectively), but also to investigate whether these metabolic pathways responded similarly to temperature, and so how temperature could affect the stoichiometry of the metabolic products. Metabolic rates, normalised to per unit of zooplankton carbon biomass, increased with increasing temperature following the Arrhenius equation. However, the activation energy differed for the various metabolic processes considered. Respiration, CR, was the metabolic activity least affected by temperature, followed by NE and PE, and as a consequence the values of the CR : NE, CR : PE and NE : PE atomic quotients were inversely related to temperature. The effects of temperature on the stoichiometry of the excreted N and P products would contribute to modifying the nutrient pool available for phytoplankton and induce qualitative and quantitative shifts in the size, community structure and chemical composition of primary producers that could possibly translate to the whole Arctic marine food web.

We determined the total and dissolved extracellular enzymatic activity (EEA) of α-glucosidase and β-glucosidase (AGase and BGase), alkaline phosphatase (APase) and leucine aminopeptidase (LAPase) activities in the epi-, meso- and bathypelagic waters of the subtropical Northeast Atlantic. EEA was also determined in treatments in which bacterial EEA was inhibited by erythromycin. Additionally, EEA decay experiments were performed with surface and deep waters to determine EEA lifetimes in both water masses. The proportion of dissolved to total EEA (66–89 %, 44–88 %, 57–82 % and 86–100 % for AGase, BGase, APase and LAPase, respectively) was generally higher than the cell-associated (i.e., particulate) EEA. The percentage of dissolved to total EEA was inversely proportional to the percentage of erythromycin-inhibited to total EEA. Since erythromycin-inhibited plus dissolved EEA equaled total EEA, this tentatively suggests that cell-associated EEA in the open oceanic water column is almost exclusively of bacterial origin. The decay constants of dissolved EEA were in the range of 0.002–0.048 h−1 depending on the type of extracellular enzyme, temperature and depth in the water column. Although dissolved EEA can have different origins, the major contribution of Bacteria to cell-associated EEA and the long life-time of dissolved EEA suggest that Bacteria—and not mesophilic Archaea—are essentially the main producers of EEA in the open subtropical Northeast Atlantic down to bathypelagic layers.

Keywords: culture; isolation; single cell; chlorarachnea; novelty; heterotrophic flagellates

Protists (unicellular eukaryotes) arguably account for most eukaryotic diversity and are central players of the biosphere. Known protist diversity and biology is largely based on cultured strains. Yet, environmental molecular surveys have unveiled entirely novel lineages that, as their prokaryotic counterparts, are essentially uncultured. Culture bias is an important drawback for any microbe-related science and is particularly severe for heterotrophic protists, which depend on organic food sources for growth. Here, we show how ecologically significant bacterivorous protists have been brought into culture by mimicking in situ conditions. Single cells sorted by serial dilution or flow cytometry were inoculated into seawater amended with natural bacterial assemblage at nearly in situ abundances. Strains belonging to lineages only known so far from environmental sequencing were isolated. Among them, Minorisa minuta gen. nov. sp. nov. forms a novel branch within Rhizaria, holding a key evolutionary position, and with an average size of 1.4 μm represents one of the smallest bacterial grazers known to date. It has a worldwide planktonic distribution and can account for 5% of heterotrophic protists communities in coastal waters. Physiological features of this strain can partly explain its success in the environment. Culturing ecologically relevant but elusive protists provide invaluable material for ecophysiology, genomics, ecosystem modeling and evolutionary issues.

We report the development and validation of a qPCR based method for estimation of the toxic benthic dinoflagellate Ostreopsis cf. ovata in the complex matrix of marine aerosol at Sant Andreu de Llavaneres beach (northwestern Mediterranean Sea). Toxic events in humans after inhalation or cutaneous contact have been reported during O. cf. ovata blooms and were attributed to palytoxin (PLTX)-like compounds produced by this microalga. Similar PCR efficiencies of plasmid and cellular environmental standard curves (98 and 100%, respectively) allowed obtaining the rDNA copy number per cell. The analytical sensitivity was set at 2 × 100 rDNA copy number and 8 × 10–4 cell per reaction. Based on spiking experiments, we evaluated the aerosol filter inhibitory activity and recovery rate of cells from filters, then normalized the abundance data of toxic O. cf. ovata. The abundance in marine aerosol during the bloom varied in the range of 1–102 cells per filter. Analytical determinations were also applied to detect palytoxin in field samples. No palytoxin was detected in the aerosol filters, and the estimation of PLTX like-compound concentrations in microepiphytic assemblages varied between 0.1 and 1.2 pg/cell.

We analyze the short-term transition, on time scales of the order of days and weeks, of the surface fields in the coastal transition zone off Northwest Africa, between 15ºN and 25ºN, during winter and spring 2005 and 2006. This is a complex region characterized by the baroclinic coastal jet north of Cape Blanc, along-shore convergence and water exportat the Cape Blanc giant filament, and substantial mesoscale variability between Capes Verde and Blanc.We use the anomalies of the wind impulse and two different coastal upwelling indexes, evaluated off 17ºN, 20ºN and 23ºN, in order to assess the importance of wind forcing in this short-term variability. We also employ daily and weekly surface maps of wind, temperature, surface height and currents to investigate which are the mechanisms that lead to the relatively fast changes in the flow patterns. The coastal baroclinic jet and the Cape Blanc giant filament are ubiquitous features, the two being intrinsically related through the intensity of upwelling off Cape Blanc. Therefore, the strength of both features responds, to a large extent, to the fluctuations of the northeasterly winds; their intensity is greater in spring than winter but during both seasons they experience relatively fast oscillations related to the intermittency of the wind field. Themesoscalar features are visible in the entire domain, with time scales typically of the order of two weeks, but be come prominent in the southern region during spring, apparently related to an intense northward coastal jet south of Cape Blanc.

The ocean surface velocity field in the Cape Blanc region, off Northwest Africa, is investigated with the maximum cross-correlation (MCC) method applied to channel- 4 Advanced Very High Resolution Radiometer satellite images. An initial sensitivity analysis allows us to select the four parameters that provide maximum area coverage and the best velocity resolution, while limiting the standard deviation for each velocity component within reasonable values. These are (m, n, MV, CT)=(22, 32, 50, 0.6), where m and n are the number of pixels of the search window (SW) and reference window (RW), respectively, MV is the maximum possible velocity (in cm s−1), and CT is a correlation threshold for a feature to be tracked. A total of 489 images, for years 2005 and 2006, are analysed, and 106 velocity maps are generated with good coverage of the coastal transition zone (CTZ), most of them for the winter (34) and spring (59) seasons. We remove spurious data using the method’s own filters (MV, CT, and a neighbour-vector comparison), requesting the velocity components to have Gaussian distributions and smoothing the resulting velocity fields with a median-vector filter. The instantaneous velocity maps illustrate the response of the alongshore coastal jet north of Cape Blanc (and its extension along the Cape Verde frontal region) to wind forcing, as well as the presence of numerous mesoscalar features (100–300 km wide) superposed on a westward offshore transport south of Cape Blanc. We also produce mean and standard deviation winter and spring velocity maps, which are compared with the corresponding mean sea surface temperature fields. The along-shore and offshore flow is better defined and is more intense in spring than in winter, in concordance with cross-slope sharper temperature gradients during this season, and brings about a cooling of the whole region.We identify five different ubiquitous currents: a southwestward jet north of Cape Blanc, a northwestward jet off Banc d’Argin, an offshore convergent jet, a spring jet-like feature at 18◦ N, and a southward flow in the southwestern CTZ.

We explore the underlying mechanisms of the early life history dynamics of the European anchovy, Engraulis encrasicolus, in the SW Mediterranean. By using a 3D ROMS hydrodynamic model coupled to an individual-based model (IBM) of the larval stages of the European anchovy, we tested the following hypotheses: (1) the plausible effective spawning zones (those generating late larvae to the known nursery grounds) are mainly found in the vicinity of Malaga Bay, as suggested by published empirical data; (2) the observed, back-calculated growth of larvae sampled in the nursery grounds can be reasonably simulated by a simple temperature-dependent growth model; and (3) the inclusion of biological behavior in the IBM significantly improves the match between the observed and modeled late-larval recruitment and/or growth patterns. We performed simulations for the peak spawning season in 2008, for which survey data were available, and an average climatological run. Hypothesis 1 was accepted, whereas hypothesis 2 resulted in a good imitation of anchovy growth only after 10 days post-hatch. The inclusion of an empirically derived equation for egg buoyancy in the model (hypothesis 3) resulted in a slight improvement of the model of late-larval recruitment patterns. Finally, our model was used to explore possible retention-based nursery areas in the whole Alboran Sea. Our simulations showed to agree well with the existing data both in the European and in the African coast and confer the physics a dominant role in shaping the spatial dynamics of early life stages of anchovy in the area.

Keywords: marine diatoms fossil record Late Quaternary abrupt climate change Heinrich events dispersal community stability

The high temporal resolution of the marine microfossil record makes it possible to explore how microbial communities responded to abrupt climate changes in the past. We analysed changes in species richness and total abundance of marine diatoms in sedimentary records from the Mauritanian upwelling system and the Panama Basin spanning the last 100 000 years. The analysis shows instances of community change and recovery linked to episodes of rapid, sub-millennial scale climate change (e.g. Heinrich events). The probability of sampling a given species during the perturbation increased with the mean abundance of the species in the database, indicating that (i) dominant species were persistent through long periods of time and (ii) rare species, with low population densities, accounted for much of the variability in species richness. To the extent that contemporaneous climate change falls within the range of climate variability analysed here, our results point to important changes in the structure of marine diatom communities, yet these changes will be reversible. These results highlight the importance of integrating fossil data and ecological theories to understand the effect of climate change on the ecological and biogeochemical functioning of marine ecosystems.

Keywords: marine diatoms fossil record Late Quaternary abrupt climate change Heinrich events dispersal community stability

The high temporal resolution of the marine microfossil record makes it possible to explore how microbial communities responded to abrupt climate changes in the past. We analysed changes in species richness and total abundance of marine diatoms in sedimentary records from the Mauritanian upwelling system and the Panama Basin spanning the last 100 000 years. The analysis shows instances of community change and recovery linked to episodes of rapid, sub-millennial scale climate change (e.g. Heinrich events). The probability of sampling a given species during the perturbation increased with the mean abundance of the species in the database, indicating that (i) dominant species were persistent through long periods of time and (ii) rare species, with low population densities, accounted for much of the variability in species richness. To the extent that contemporaneous climate change falls within the range of climate variability analysed here, our results point to important changes in the structure of marine diatom communities, yet these changes will be reversible. These results highlight the importance of integrating fossil data and ecological theories to understand the effect of climate change on the ecological and biogeochemical functioning of marine ecosystems.

Keywords: Mediterranean starry ray;Endemic skate; Sentinel species; Demersal communities; Reproduction; Growth; Mortality; Diet; Food web model; Fishing impact; Recovery

The Mediterranean endemic starry ray (Raja asterias) is one of the few demersal skates that are still present in Mediterranean exploited ecosystems. However, this species has declined with time, its presence in survey data is scarce, and limited information is available about its ecology and the impact of fishing on its populations. We examined key ecological features of this species such as reproduction, trophic behaviour and growth. We assessed the ecological role of this species within the food web using an ecological model of a North-Western Mediterranean ecosystem and setting the new information in an ecosystem context. We then explored impacts of fishing on the starry ray population using a dynamic temporal model and we developed fishing scenarios aiming at recovering the species. Field and modelling results showed that the starry ray is a potentially ecologically important predator of the Mediterranean demersal ecosystems, but its ecological importance in the food web is moderate-low since it is present at a low abundance. Results confirmed that the species has been and still is highly impacted by fishing and it is very sensitive to increasing fishing impacts. However, alternative fishing scenarios showed that Mediterranean starry ray populations may respond under decreasing trawl fishing effort and could substantially recover. The recovery of the starry ray may be accompanied by recovery of other demersal species and could have wider ecosystem impacts. Therefore, this skate could be a good sentinel species to indicate ecosystem health in current Mediterranean Sea ecosystems. These new insights may be useful to ensure the recovery and conservation of this species while triggering the recovery of exploited marine communities in the Mediterranean Sea.

Keywords: Sustainable fisheries; Marine resources; Code of Conduct; Ecological indicators

The Code of Conduct for Responsible Fisheries developed in 1995 by the Food and Agriculture Organization (FAO) of the United Nations includes a set of recommendations for reducing the negative impacts of fishing activities on marine ecosystems. The Code is widely believed to be an important tool for fisheries management and, although the Code is voluntary, all stakeholders concerned with the management and development of fisheries, and conservation of fishery resources, are actively encouraged to implement it. Previous analysis at global scale showed widespread low compliance with the Code of Conduct that may be partly due to a lack of empirical support for the overall ecological benefits of adhering to the Code. Here we evaluated these ecological effects by comparing compliance with the Code to changes in five ecological indicators that quantify the ecosystem effects of fishing. We used the loss in production index and the related probability of sustainable fishing index, the mean trophic level of the catch, total catches, and the primary production required to sustain the catch. We also tested if regional differences and development status of countries influenced the results of ecological indicators. Results indicate that countries with higher levels of compliance with the FAO Code of Conduct in 2008 experienced a decrease in the Loss in Production index and an increase in fisheries sustainability from the 1990s to 2000s. We conclude that better implementation of the Code of Conduct may have had overall positive ecological effects with time. A significant decrease in total catch and primary production required with higher compliance was also observed. While a significant increase in ecosystem sustainability was observed after a decade of adoption of the Code at high levels of compliance, further ecosystem degradation had taken place where compliance with the Code was below a given threshold (4, from a ranking of 0–10). Therefore, since compliance with the Code is still low or very low worldwide, these results may encourage individual countries to adopt well-established fishery management measures in order to increase the ecological sustainability of marine resources.

Keywords: Ecosystem-based approach to fisheries (EAF) Mediterranean and Black Seas Scientific strategy Scientific network Roadmap Toolbox Coordination Transversal approach

This manuscript is an outcome of the workshop entitled “Scientific Strategy for a Global Approach to Promote Regional Ecosystem-based Approach to Fisheries (EAF) in the Mediterranean and Black Seas” held in Sète (France) in July 2012. The workshop was organized by Work-Package 6 of the coordination action “Coordinating Research in Support to Application of Ecosystem Approach to Fisheries and Management Advice in the Mediterranean and Black Seas” (CREAM), funded by the EU Seventh Framework Programme. The main aim of the workshop was to discuss what is needed to advance on a robust scientific strategy to promote EAF in the Mediterranean and Black Seas. Participants discussed a series of scientific recommendations for promoting the coordination of initiatives with the aim of contributing to an operational EAF. Discussion was carried out on (i) what can be learnt from case studies that promote EAF worldwide, (ii) how a scientific strategy for EAF can be built, and (iii) which are the future scientific networking activities to promote EAF. Here we summarize the discussions and conclusions of the workshop, and we present the recommendations and future initiatives proposed to advance EAF in the Mediterranean and Black Seas region. Participants to the workshop agreed that the achievement of a common vision regarding the Mediterranean and Black Seas region should be one of the first and most important elements towards a successful EAF. A common vision should recognise the need to promote the reconciliation of conservation and exploitation, and to aim for a good socioeconomic and ecological status. The vision should also promote the recovery of ecosystems and rebuilding of marine commercial stocks and predator species. EAF initiatives, carried out worldwide, illustrated that whilst the development of relevant science is essential to render the EAF process operational, the involvement of stakeholders is the key factor that characterises successful initiatives. This is especially important in the Mediterranean and Black Sea context, where many stakeholders show conflicting interests and associated trade-offs. During the workshop, it became clear that numerous overlapping and poorly coordinated initiatives for EAF exist in the region. The group discussed the integration of the existing initiatives in a coordinated manner and arrived to the conclusion that a scientific network to promote coordinated and operational EAF initiatives created by the scientific community is needed. Ultimately, the discussion was focused on how to build such a scientific network and how to proceed to consolidate the regional scientific vision, with a clear scientific strategy and roadmap, including a diversified toolbox. In the short term, the proposed EAF scientific network should (i) document and coordinate scientific initiatives, (ii) promote the sharing of scientific information and capabilities, (iii) promote data availability, integration, harmonization, and interoperability, (iv) promote training capabilities and capacity building of the scientific community and stakeholders, (v) establish mechanisms to disseminate knowledge, and communicate EAF benefits, and (vi) promote concrete regional scientific initiatives. In the long run, the network should promote scientific advice on EAF to inform adaptive management, and promote EAF implementation at different geographical scales (from local to regional) using a transversal approach. The ultimate goal of the network should be to link management advice to good scientific information providing useful advice to address management objectives (i.e. present the trade-offs), and creating a knowledge-based management approach.

Keywords: coccolithophores, X-ray microanalysis, calcium, magnesium, holococcoliths, heterococcoliths

Coccolithophores produce calcium carbonate platelets, the coccoliths, and play a significant role in the C and Ca cycles. Coccoliths are important components of marine biogenic carbonate sediments and their chemical analysis can provide tools for paleoceanographic investigation. In particular, the Mg/Ca ratio of coccoliths has been proposed as a paleotemperature proxy. The present study uses X-ray microanalysis to evaluate the Ca and Mg composition of heterococcoliths and holococcoliths of different coccolithophore species. Our measurements indicate that the Mg values in heterococcoliths do not exceed a low threshold and do not show any consistent relationship with the Ca content, while the Mg content of holococcoliths spans a wider range, can reach much higher values and shows a linear relationship with the Ca content. Several heterococcolithophore species tend to form separate clusters according to their Mg and Ca values. Within each cluster, there were no consistent differences in the Mg/Ca ratios of specimens sampled at different temperatures or seasons, suggesting that using the Mg/Ca ratio as a paleothermometer may be problematic. Our findings could have implications for the interpretation of the fossil record because Mg-rich calcite dissolves more easily.

Keywords: Ecosystem function; ellipsoid; extinction; invasion; multidimensional stability; persistence; resilience; resistance; robustness; variability

Ecological stability is touted as a complex and multifaceted concept, including components such as variability, resistance, resilience, persistence and robustness. Even though a complete appreciation of the effects of perturbations on ecosystems requires the simultaneous measurement of these multiple components of stability, most ecological research has focused on one or a few of those components analysed in isolation. Here, we present a new view of ecological stability that recognises explicitly the non-independence of components of stability. This provides an approach for simplifying the concept of stability. We illustrate the concept and approach using results from a field experiment, and show that the effective dimensionality of ecological stability is considerably lower than if the various components of stability were unrelated. However, strong perturbations can modify, and even decouple, relationships among individual components of stability. Thus, perturbations not only increase the dimensionality of stability but they can also alter the relationships among components of stability in different ways. Studies that focus on single forms of stability in isolation therefore risk underestimating significantly the potential of perturbations to destabilise ecosystems. In contrast, application of the multidimensional stability framework that we propose gives a far richer understanding of how communities respond to perturbations.

Keywords: Weddell Sea · Benthic–pelagic coupling · Stable isotope · Biochemical balance · Lipids · Energy storage · Octocoral · Passive suspension feeder

The trophic ecology of Antarctic anthozoans and their role in benthic-pelagic coupling processes is poorly understood. We studied 7 gorgonian species (Primnoisis sp., Fannyella nodosa, Ainigmaptilon antarcticum, Notisis sp., Primnoella sp., Dasystenella sp. and Thouarella sp.) in 2 Antarctic regions: the Eastern Weddell Sea and the Bransfield Strait (Antarctic Peninsula) in austral autumn 2000, a period in which primary productivity drastically decreases. We aimed at finding the main food sources for these gorgonians and to elucidate the strategies of the 7 species in this season, relating the obtained data with their biology and ecology. Stable isotope data of the 7 gorgonian species was virtually the same as that measured in the phytodetritus of the so called ‘green carpets’ and in microzooplankton (δ13C from -27.7 to -24.8‰; δ15N from 4.1 to 7.5‰). A large proportion of the gorgonian’s diet seems to be based on sedimented and resuspended material, which supports the hypothesis that some suspension feeders deal successfully with the Antarctic winter by consuming phytoplankton sedimented in the ‘green carpets’. While stable isotope analysis suggested similar food sources for 7 species, the biochemical balance indicated different energy storage as lipid values (mean ±SD) ranged from 105.1 ± 99 to 776.4 ± 354.1 µg lipids mg-1 organic matter depending on the species. Our results contribute to a better understanding of the trophic ecology of benthic Antarctic gorgonians and their strategies for coping with autumn conditions in this polar environment.

Keywords: Biodiversity; Morphological diversity; Geometrical morphology; Fish assemblages

Biological diversity can be measured using ecological, taxonomic and functional indices, although numerous studies have concluded that organism morphology can be also a source for computing diversity indices. In the present study, we characterized fish morphology using geometric morphology, which included body shape landmarks as well as the morphology of fins, and we computed the correlation among ecological, taxonomic, functional and morphological indices (including a new index defined here called “morphological richness”). Morphological indices were calculated both from abundance data and presence/absence data. To carry out this study, thirteen fish assemblages of two different areas of the Catalan coast (north-western Mediterranean) were analyzed. The data was sampled by commercial fishing vessels using trammel nets. The results clearly indicated that each type of morphological index is related to one dimension of the biodiversity space. Furthermore, we demonstrated that presence/absence data provided the similar results as abundance data when using morphological indices, opening the possibility to analyze the evolution of fish assemblages over time from species checklists collected in experimental surveys from the late XIX century to the present.

Keywords: representation of contours; cubic spline interpolation, splines; least squares filter; B-splines; filter approximation

Classical Cubic spline interpolation needs to solve a set of equations of high dimension. In this work we show how to compute the interpolant using a FIR digital filter, with a reduced number of operations per interpolated point and high accuracy. Additionally, the computation can be made on real time as the signal samples are acquired. Following this approach, we show how to obtain easily the derivatives of the interpolant in a similar way, and also signal approximations to reduce the oscillations that appear when using high order splines. These techniques are very well suited to compute continuous representations of image contours on closed shapes and to find its curvature and singularities.

Alcyonium acaule (Cnidaria, Octocorallia) is a common, hard-bottom soft coral in the northwestern Mediterranean Sea. This study describes sexual reproduction and the gamete development cycle of this soft coral. A population at 15–18 m depth in the Marine Protected Area of the Medes Islands (42º02′55″ N, 3º13′30″ E) was sampled from July 1994–August 1995. A. acaule is gonochoristic and a surface brooder, spawning once a year in early summer. The mean diameter of ripe spermatic sacs was 400 ± 91 (SD) μm, and the mean diameter of mature oocytes was 473 ± 37 (SD) μm. There were 30 spermatic sacs polyp−1 in males and 14 oocytes polyp−1 in females. Different phases of gametogenesis in female and male colonies were examined separately with respect to seasonal changes in bottom temperature and solar irradiance. The data suggest that the relatively constant temperatures in January–April are probably not related to oocyte maturation, but that rising temperatures in May could affect sperm maturation. Rapidly increasing solar irradiance in March may be the trigger for vitellogenesis and oocyte maturation, although the mechanism for this in anthozoans is not understood.

Soil Moisture and Ocean Salinity (SMOS), launched on 2 November 2009, is the first satellite mission addressing sea surface salinity (SSS) measurement from space. Its unique payload is the Microwave Imaging Radiometer using Aperture Synthesis (MIRAS), a new two-dimensional interferometer designed by the European Space Agency (ESA) and operating at the L-band frequency. This article presents a summary of SSS retrieval from SMOS observations and shows initial results obtained one year after launch. These results are encouraging, but also indicate that further improvements at various data processing levels are needed and hence are currently under investigation.

Keywords: Lipids Microalgae Photobioreactor Dinoflagellates Raphidophytes Biodiesel

The principal fatty acids from the lipid profiles of two autochthonous dinoflagellates (Alexandrium minutum and Karlodinium veneficum) and one raphidophyte (Heterosigma akashiwo) maintained in bubble column photobioreactors under outdoor culture conditions are described for the first time. The biomass production, lipid content and lipid productivity of these three species were determined and the results compared to those obtained when the strains were cultured indoors. Under the latter condition, the biotic values did not significantly differ among species, whereas under outdoor conditions, differences in both duplication time and fatty acids content were observed. Specifically, A. minutum had higher biomass productivity (0.35 g·L−1 day−1), lipid productivity (80.7 mg lipid·L−1 day−1) and lipid concentration (252 mg lipid·L−1) at harvest time (stationary phase) in outdoor conditions. In all three strains, the growth rate and physiological response to the light and temperature fluctuations of outdoor conditions greatly impacted the production parameters. Nonetheless, the species could be successfully grown in an outdoor photobioreactor and were of sufficient robustness to enable the establishment of long-term cultures yielding consistent biomass and lipid production.

Keywords: Apicomplexa; dinoflagellates; Parvilucifera; perkinsids; Parasite

This study begins with a description of the infective process in the dinoflagellate type host Alexandrium minutum by a strain of the parasitoid, Parvilucifera sinerae, including the morphologies of the various dinoflagellate and parasitoid stages during the infection. Then, the susceptibility of 433 microalgal strains to P. sinerae infection was studied. The parasitoid was found to be capable of infecting several dinoflagellate species of the genera Alexandrium, Coolia, Dinophysis, Fragilidium, Gambierdiscus, Gymnodinium, Gyrodinium, Heterocapsa, Kryptoperidinium, Lepidodinium, Ostreopsis, Pentapharsodinium, Protoceratium, Scrippsiella, and Woloszynskia. Intra-strain variability was observed as well, such that within the same dinoflagellate species some strains were infected whereas others were not. Likewise, species of other dinoflagellate genera were not infected, such as Akashiwo, Amphidinium, Barrufeta, Bysmatrum, Karenia, Karlodinium, Prorocentrum, and Takayama. Moreover, P. sinerae was not able to infect any of the tested haptophyte, diatom, and chlorophyte species. In natural samples screened for P. sinerae infectivity, several dinoflagellate species of the genera Alexandrium, Coolia, Gonyaulax, Gymnodinium, Phalacroma, Protoperidinium, and Scrippsiella were identified as susceptible. Sporangia size was found to be proportional to the size of the host, and variations in the sporangia size were observed to influence their maturation time.

Keywords: Alexandrium; dimethylsulphide; dinoflagellates; infochemistry; parasitoid; Parvilucifera

Parasitoids are a major top-down cause of mortality of coastal harmful algae, but the mechanisms and strategies they have evolved to efficiently infect ephemeral blooms are largely unknown. Here, we show that the generalist dinoflagellate parasitoid Parvilucifera sinerae (Perkinsozoa, Alveolata) is activated from dormancy, not only by Alexandrium minutum cells but also by culture filtrates. We unequivocally identified the algal metabolite dimethylsulphide (DMS) as the density-dependent cue of the presence of potential host. This allows the parasitoid to alternate between a sporangium-hosted dormant stage and a chemically-activated, free-living virulent stage. DMS-rich exudates of resistant dinoflagellates also induced parasitoid activation, which we interpret as an example of coevolutionary arms race between parasitoid and host. These results further expand the involvement of dimethylated sulphur compounds in marine chemical ecology, where they have been described as foraging cues and chemoattractants for mammals, turtles, birds, fish, invertebrates and plankton microbes.

Keywords: mixotrophic flagellates heterotrophic flagellates prey selection CARD-FISH oligotrophic lakes

We investigated the selective predation of mixotrophic and heterotrophic flagellates (MF and HF) on different heterotrophic prokaryote phylotypes (HPP; Bacteria + Archaea) living in natural assemblages from oligotrophic Antarctic lakes. In situ prey preference was analyzed for the first time on different mixotrophic taxa (Pseudopedinella sp., Ochromonas-like cells, Chrysophyceae >5 µm). The relative abundances of seven different HPP hybridized by CARD-FISH (catalyzed reporter deposition-fluorescent in situ hybridization) in natural community were compared with the proportions of hybridized cells inside digestive vacuoles. Our results showed some general trends to selectivity over some HPP. Alphaproteobacteria and Betaproteobacteria were the most abundant groups, and strikingly, a negative selection trend was detected in most samples by all bacterivorous protists. In contrast, for Actinobacteria a positive selection trend was observed in most samples, whereas Bacteroidetes seemed to be randomly preyed upon. Interestingly, similar prey preferences were observed in all bacterivorous flagellates. Our results suggest that phylogenetic affiliation determines part of the process of prey selection by protists in these lakes. Nevertheless, other features, such as cell size, morphology and the presence of the S-layer, might also significantly contribute to prey selectivity on the HPP.

Keywords: Ciliophora; copy number; intragenomic variability; rDNA; quantitative PCR; sequence polymorphism.

The copy number and sequence variation of the ribosomal DNA (rDNA) operon are of functional significance in evolution and ecology of organisms. However, the relationship between copy number and sequence variation of rDNA in protists has been rarely studied. Here we quantified rDNA copy numbers of oligotrich and peritrich ciliate species using single-cell quantitative PCR. We also examined the rDNA sequence variation by using single-cell PCR, cloning, and sequencing of multiple clones. We found that the rDNA copy numbers per cell were extremely high and different among even congeners, with the highest record of about 310,000. There was substantial intraindividual haplotype diversity and nucleotide diversity for the rDNA markers, with sequence differences primarily characterized by single nucleotide polymorphisms. Haplotype and nucleotide diversity was positively correlated to the rDNA copy number. Our findings provide evidence that: (1) ciliates generally have much higher rDNA copy numbers than other protists and fungi, which could lead to overestimation of the relative abundance of ciliates in environmental samples when rDNA sequence-based methodologies are used; and that (2) the rDNA might not always evolve in a strictly concerted manner in ciliates, which may raise problems in rDNA-based inference of species richness and phylogeny.

Submarine canyons are known as one of the seafloor morphological features where living cold-water coral (CWC) communities develop in the Mediterranean Sea. We investigated the CWC community of the two westernmost submarine canyons of the Gulf of Lions canyon system: the Cap de Creus Canyon (CCC) and Lacaze-Duthiers Canyon (LDC). Coral associations have been studied through video material recorded by means of a manned submersible and a remotely operated vehicle. Video transects have been conducted and analyzed in order to obtain information on (1) coral bathymetric distribution and density patterns, (2) size structure of coral populations, and (3) coral colony position with respect to the substrate. Madrepora oculata was the most abundant CWC in both canyons, while Lophelia pertusa and Dendrophyllia cornigera mostly occurred as isolated colonies or in small patches. An important exception was detected in a vertical cliff in LDC where a large L. pertusa framework was documented. This is the first record of such an extended L. pertusa framework in the Mediterranean Sea. In both canyons coral populations were dominated by medium and large colonies, but the frequent presence of small-sized colonies also indicate active recruitment. The predominant coral orientation (90° and 135°) is probably driven by the current regime as well as by the sediment load transported by the current flows. In general, no clear differences were observed in the abundance and in the size structure of the CWC populations between CCC and LDC, despite large differences in particulate matter between canyons.

Keywords: Antarctic; Collaborative East-Antarctic MARine Census; Mica micula ; post-larval stage; Pyrostephidae

The samples obtained during the 2008 Collaborative East-Antarctic MARine Census (CEAMARC) campaign in the Southern Ocean on the TR/V Umitaka Maru contained many specimens of the physonect post-larval stage known as Mica micula, in varying stages of development, allowing us to complement the existing descriptions. M. micula appears to be endemic to the Southern Ocean, and its possible position in the family Pyrostephidae, in particular the species Pyrostephos vanhoeffeni, is discussed. For the first time, the definitive nectophores were observed, but they were still too underdeveloped to be assigned conclusively to any known physonect species.

Keywords: Hydrography; Hydromedusae; Pyrostephos vanhoeffeni ; Siphonophorae; Southwestern Atlantic Ocean

The special location (40–42°S in the Southwestern Atlantic Ocean) and the hydrodynamic regime (limited water exchange with open ocean) in San Matías Gulf (Argentina) seem to produce a particular fauna of planktonic cnidarians whose their abundances are mainly shaped by the Gulf circulation. Four oceanographic cruises, covering 93 stations in three different seasons during 2007 and 2008 were carried out to quantify species richness and abundance, as well as to analyse the distribution of these cnidarians. We identified 20 species of hydromedusae and one siphonophore, increasing the total number of hydromedusae for the area to 23. This value is similar to the one found in the abutting Argentine continental shelf (20), but with a different assemblage composition. Hydromedusae abundances found were low, except for a bloom of the Leptomedusa Obelia spp. during the cold season. The only siphonophore found in the area, Pyrostephos vanhoeffeni, has previously been thought to be endemic to Antarctic and sub-Antarctic waters, this being the first record for temperate waters of the Southwest Atlantic Ocean.

The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of taxonomically curated reference data sets for the targeted genes. The Protist Ribosomal Reference database (PR2, http://ssu-rrna.org/) provides a unique access to eukaryotic small sub-unit (SSU) ribosomal RNA and DNA sequences, with curated taxonomy. The database mainly consists of nuclear-encoded protistan sequences. However, metazoans, land plants, macrosporic fungi and eukaryotic organelles (mitochondrion, plastid and others) are also included because they are useful for the analysis of high-troughput sequencing data sets. Introns and putative chimeric sequences have been also carefully checked. Taxonomic assignation of sequences consists of eight unique taxonomic fields. In total, 136 866 sequences are nuclear encoded, 45 708 (36 501 mitochondrial and 9657 chloroplastic) are from organelles, the remaining being putative chimeric sequences. The website allows the users to download sequences from the entire and partial databases (including representative sequences after clustering at a given level of similarity). Different web tools also allow searches by sequence similarity. The presence of both rRNA and rDNA sequences, taking into account introns (crucial for eukaryotic sequences), a normalized eight terms ranked-taxonomy and updates of new GenBank releases were made possible by a long-term collaboration between experts in taxonomy and computer scientists.

Keywords: 50-m high K-H billows; inertial wave turbulence; Gulf of Valencia

The bottom boundary layer above sloping topography can be highly turbulent, even in deep seas. This is demonstrated here using high-resolution 1-Hz sampling temperature sensors that were moored for 5 months every 0.5 m between 6.5 and 61 m above a 572 m deep seafloor promontory on the continental slope off Valencia, Spain. Using these data, turbulence parameters have been estimated. With time and in the vertical, values vary over four orders of magnitude. They have a dominant local inertial period which is modulated by an about 11 day periodicity associated with variations in a baroclinic unstable boundary current. When this current is strong and Eastward, the upslope phase of inertial wave generates convective turbulence which reaches closest to the bottom and therefore can effect sediment dispersal. In late winter, equally strong shear-induced turbulence in 50 m high Kelvin-Helmholtz (K-H) overturns is forced by 0.2 m s−1 off/downslope motions, which are preceded by periods of warming of a few 0.01°C before the cooler near-bottom water is suddenly flushed over the promontory into the basin. Such anomalously large K-H overturns occurred 6 times in the investigated winter period.

Keywords: Computational electromagnetics, fast solvers, impedance matrix compression, method of moments, numerical simulation.

Abstract—This paper presents a modification of the adaptive cross approximation (ACA) algorithm for accelerated solution of the Method of Moments linear system for electrically large radiation and scattering problems. As with ACA, subblocks of the impedance matrix that represent the interaction between well separated subdomains are substituted by “compressed” approximations allowing for reduced storage and accelerated iterative solution. The modified algorithm approximates the original subblocks with products of sparse matrices, constructed with the aid of the ACA algorithm and of a sub-sampling of the original basis functions belonging to either subdomain. Because of the sampling, an additional error is introduced with respect to ACA, but this error is controllable. Just like ordinary ACA, sparsified ACA is kernel-independent and needs no problem-specific information, except for the topology of the basis functions. As a numerical example, RCS computations of the NASA almond are presented, showing an important gain in efficiency. Furthermore, the numerical experiment reveals a computational complexity close to N log N for sparsified ACA for a target electrical size of up to 50 wavelengths.

Keywords: multi-beam; side-scan sonar; benthic habitats; fishing disturbance; continental shelf; Mediterranean Sea

Eleven sites were located on Mediterranean continental shelves to explore the link between the physical characteristics and epibenthic fauna from soft-sediment habitats. These sites, at 32–82 m in depth, were associated with fishing grounds and the trawling intensity was estimated at the site scale to assess the effects of trawling on benthic communities. Each site was surveyed with Multi-Beam (bathymetry and backscatter), side-scan sonar, benthic grabs and a surface dredge. The sites were clustered in three habitat types. Habitat 1, with moderate trawling disturbance, was characterised by homogeneous mud and associated epifauna that was also highly homogeneous across sites. Habitat 2, with sandy mud and scattered gravel and rocks, had a high abundance of sessile suspension feeders that probably attach to the coarser substratum and benefit from the low fishing disturbance in these sites. Habitat 3 included sites with heterogeneous sediments with maërl as the prevailing biocenosis and having the highest species richness, despite being subjected to variable trawling intensity. Statistical models were used to relate environmental parameters and the species abundance. More than 3 physical variables were necessary to explain the epifaunal patterns across sites, including the percentage of mud, sediment heterogeneity and fishing effort. These analyses are an essential step for extrapolating information from benthic samples to the larger scale of habitats, mapped through acoustic surveys. Despite this, a good integration is required between the mapping of physical habitat distribution and the ecological knowledge of communities.

Keywords: Mercury bioaccumulation; Trophic level; Habitat depth; Deep-sea fish; Red shrimp Aristeus antennatus;Mediterranean

A number of studies have found high levels of mercury (Hg) in deep-sea organisms throughout the world\'s oceans, but the underlying causes are not clear as there is no consensus on the origin and cycling of Hg in the ocean. Recent findings suggested that Hg accumulation may increase with increasing forage depth and pointed to the deep-water column as the origin of most Hg in marine biota, especially its organic methylmercury (MeHg) form. In the present study, we determined the total mercury (THg) levels in 12 deep-sea fish species and a decapod crustacean and investigated their relationship with the species\' nitrogen stable isotope ratio (δ15N) as an indicator of their trophic level, average weight and habitat depth. THg levels ranged from 0.27 to 4.42 μg/g w.w. and exceeded in all, except one species, the recommended 0.5 μg/g w.w. guideline value. While THg levels exhibited a strong relationship with δ15N values and to a lesser extent with weight, the habitat depth, characterized as the species\' depth of maximum abundance (DMA), had also a significant effect on Hg accumulation. The fish species with a shallower depth range exhibited lower THg values than predicted by their trophic level (δ15N) and body mass, while measured THg values were higher than predicted in deeper-dwelling fish. Overall, the present results point out a potential risk for human health from the consumption of deep-sea fish. In particular, for both, the red shrimp Aristeusantennatus, which is one of the most valuable fishing resources of the Mediterranean, as well as the commercially exploited fish Moramoro, THg levels considerably exceeded the recommended 0.5 μg/g w.w. limit and should be consumed with caution.

Keywords: Persistent organic pollutants (POPs); Polybrominated diphenyl ether (PBDE); Deep-sea; Fish; Crustacea; Mediterranean Sea

The levels and profiles of organochlorine (OC) contaminants, including polychlorinated biphenyls (PCBs), dichlorodiphenyltrichloroethanes (DDTs), hexachlorocyclohexanes (HCHs) and penta- (PeCB) and hexachlorobenzene (HCB), as well as polybrominated diphenyl ethers (PBDEs) were determined in muscle samples of the deep-sea fish Alepocephalus rostratus, Coelorinchus mediterraneus and Lepidion lepidion and the red-shrimp Aristeus antennatus from the NW Mediterranean Sea. Mean PCB and DDT levels ranged from the highest concentrations in the fish A. rostratus (Σ7PCBs 6.93 ± 0.71 ng/g w.w. and ΣDDTs 8.43 ± 1.10 ng/g w.w.) to the lowest concentrations in the crustacean A. antennatus (Σ7PCBs 1.17 ± 0.24 ng/g w.w. and ΣDDTs 2.53 ± 0.26 ng/g w.w.). The concentrations of ΣHCHs and HCB were more than one order of magnitude lower, ranging from 0.07–0.36 ng/g w.w. and 0.03–0.15 ng/g w.w., respectively, while PeCB was only detected in a few samples. PBDE levels were approximately ten times lower than PCB and DDT concentrations, ranging from 0.47 ± 0.20 ng/g w.w. in A. antennatus to 0.92 ± 0.13 ng/g w.w. in A. rostratus. The high-molecular-weight PCBs 153, 138 and 180 represented 69–79% of Σ7PCBs in fish and 60% in the red shrimp. Moreover, in fish, the main DDT compound detected was the metabolite p,p′-DDE (70–80% of ΣDDTs), indicative of old DDT residues. In contrast, o,p′-DDE was the main DDT metabolite (49% of ΣDDTs) in shrimp, while the parent compound p,p′-DDT and its metabolite p,p′-DDE exhibited similar proportions of 16% and 21%, respectively. For PBDEs, the most abundant congeners were BDEs 28, 47, 99, 100 and 154 in fish (> 70% Σ14PBDEs), while BDEs 153 and 209 were also important in A. antennatus, suggesting different uptake and/or biotransformation rates of PBDEs between fish and crustacea. In this sense, the ratios BDE 99/100, BDE 153/154, and BDE 47/99 were determined as proxies for BDE metabolization capacities and contrasted among species.

Biliary polycyclic aromatic hydrocarbon (PAH) and alkylphenol (AP) metabolites, hepatic gene expression, and corresponding enzyme activities were determined in the deep-sea fish Alepocephalus rostratus from two sites within the Mediterranean. Biliary metabolites included the hydroxylated PAH metabolites (OH-PAHs) 1-naphthol, 2-naphthol, 9-fluorenol, 9-phenanthrol, and 1-pyrenol and the APs 4-nonylphenol (NP) and 4-tert-octylphenol (OP). Five biomarker genes, namely, cytochrome P450 1A (CYP1A), vitellogenin (Vtg), catalase (CAT), Cu/Zn-superoxide-dismutase (Cu/Zn-SOD), and glutathione reductase (GR), were quantified using qRT-PCR. Moreover, corresponding enzyme activities (ethoxyresorufin-O-deethylase (EROD), CAT, SOD, and GR) were also determined. The ΣOH-PAHs detected ranged from 21.1 to 300.3 ng/g bile and were mainly composed of 1-naphthol. Both NP and OP metabolites were detected in all samples with concentrations ranging from 17.4 to 107.2 ng/g bile and 4.9 to 17.3 ng/g bile, respectively, and levels were significantly higher in samples from the western Mediterranean (WM) compared to those from the Catalan slope (CS). Accordingly, gene expression was significantly induced in male fish from the WM; however, these results were not reflected in enzyme activity levels. In particular, males caught at 2000 m in the WM exhibited 35-times higher Vtg levels compared to those from the CS, suggesting that endocrine-disrupting effects may potentially be occurring in such remote environments as the deep-sea.

The inversion of the Advanced Scatterometer (ASCAT) backscatter measurement triplets generally leads to two wind ambiguities with similar wind speed values and opposite wind directions. However, for up-, down- and crosswind (with respect to the mid-beam azimuth direction) cases, the inversion often leads to three or four wind solutions. In most of such cases, the inversion residuals or maximum likelihood estimators (MLEs) of the third and fourth solutions (i.e. high-rank solutions) are substantially higher than those of the first two (low-rank) ambiguities. This indicates a low probability for the high-rank solutions and thus essentially dual ambiguity. This paper investigates the characteristics of ASCAT high-rank wind solutions under different conditions with the objective of developing a method for rejecting the spurious high-rank solutions. The implementation of this rejection procedure improves the effectiveness of the ASCAT wind quality control (QC) and ambiguity removal procedures.

Keywords: gear competition, asymmetric index, Mediterranean fisheries

An asymmetric index was developed to measure the competition relationships among fishing fleets (or gears or métiers) in a multispecies fishery. This index can be used to measure the degree of dominance of each fleet and its level of independence from competition. To illustrate the concepts, the index is applied to two case studies using two datasets, both from Catalonia, NW Mediterranean. The results show that in both case studies the dominance of bottom trawl over most other gears (especially small-scale ones) is evidenced and quantitatively measured. Bottom trawl is also highly independent of the others. Purse seine appears to be quite independent, but not dominant over the other gears. A practical use of these asymmetric indices is to assist fisheries managers in the decision-making process to optimize the allocation of fishing effort, including energy efficiency, and to reduce environmental impact.

Keywords: Azores triple junction; São Jorge Island; GPS; Tectonics; Volcanism

A network of geodetic markers for high-precision Global Positioning System (GPS) surveying was established in 2001 in the island of São Jorge, at the Azores triple junction, where the North America–Eurasia–Nubia plates meet. The aim was to monitor tectonic, volcanic, and landslide-induced surface deformation in an active tectono-volcanic region. The network consisted of 17 stations, and was occupied in 2001, 2004, and 2010. GPS observations from the three episodic campaigns were analyzed using the latest geophysical models and geodetic procedures to generate a velocity field for São Jorge Island. Surface velocities estimated at 15 inland locations reveal that São Jorge is moving neither with Eurasia nor with Nubia and presents two sectors with different behavior. The NW sector of the island is moving at a rate of 2.2 ± 0.3 mm/yr to N82° ± 6° while the SE sector is moving at a rate of 1.4 ± 0.3 mm/yr to N109° ± 11°, when compared to the velocity of Nubia predicted by ITRF2008-PMM. This velocity field cannot be explained by slip along the active faults that cross the island, nor is compatible with volcanic deformation on the active volcanic rift zones. It is suggested that the velocity differences that are measured represent deformation related to local sub-surficial magmatic/volcanic processes occurring near the island. This intra-island deformation may also be related to the stress field and seafloor spreading occurring in an area situated on the western sector of the Azores Plateau, reflecting the presence of WNW–ESE volcanic structures, along which magma intrusion produces NE–SW dilatation, bounded to the East by a NE–SW trending structure, probably of tectonic nature, working as a dextral transfer zone.

Spatial prioritization in conservation is required to direct limited resources to where actions are most urgently needed and most likely to produce effective conservation outcomes. In an effort to advance the protection of a highly threatened hotspot of marine biodiversity, the Mediterranean Sea, multiple spatial conservation plans have been developed in recent years. Here, we review and integrate these different plans with the goal of identifying priority conservation areas that represent the current consensus among the different initiatives. A review of six existing and twelve proposed conservation initiatives highlights gaps in conservation and management planning, particularly within the southern and eastern regions of the Mediterranean and for offshore and deep sea habitats. The eighteen initiatives vary substantially in their extent (covering 0.1–58.5% of the Mediterranean Sea) and in the location of additional proposed conservation and management areas. Differences in the criteria, approaches and data used explain such variation. Despite the diversity among proposals, our analyses identified ten areas, encompassing 10% of the Mediterranean Sea, that are consistently identified among the existing proposals, with an additional 10% selected by at least five proposals. These areas represent top priorities for immediate conservation action. Despite the plethora of initiatives, major challenges face Mediterranean biodiversity and conservation. These include the need for spatial prioritization within a comprehensive framework for regional conservation planning, the acquisition of additional information from data-poor areas, species or habitats, and addressing the challenges of establishing transboundary governance and collaboration in socially, culturally and politically complex conditions. Collective prioritised action, not new conservation plans, is needed for the north, western, and high seas of the Mediterranean, while developing initial information-based plans for the south and eastern Mediterranean is an urgent requirement for true regional conservation planning.

The recently completed European Census of Marine Life, conducted within the framework of the global Census of Marine Life programme (2000–2010), markedly enhanced our understanding of marine biodiversity in European Seas, its importance within ecological systems, and the implications for human use. Here we undertake a synthesis of present knowledge of biodiversity in European Seas and identify remaining challenges that prevent sustainable management of marine biodiversity in one of the most exploited continents of the globe. Our analysis demonstrates that changes in faunal standing stock with depth depends on the size of the fauna, with macrofaunal abundance only declining with increasing water depth below 1000 m, whilst there was no obvious decrease in meiofauna with increasing depth. Species richness was highly variable for both deep water macro- and meio- fauna along latitudinal and longitudinal gradients. Nematode biodiversity decreased from the Atlantic into the Mediterranean whilst latitudinal related biodiversity patterns were similar for both faunal groups investigated, suggesting that the same environmental drivers were influencing the fauna. While climate change and habitat degradation are the most frequently implicated stressors affecting biodiversity throughout European Seas, quantitative understanding, both at individual and cumulative/synergistic level, of their influences are often lacking. Full identification and quantification of species, in even a single marine habitat, remains a distant goal, as we lack integrated data-sets to quantify these. While the importance of safeguarding marine biodiversity is recognised by policy makers, the lack of advanced understanding of species diversity and of a full survey of any single habitat raises huge challenges in quantifying change, and facilitating/prioritising habitat/ecosystem protection. Our study highlights a pressing requirement for more complete biodiversity surveys to be undertaken within contrasting habitats, together with investigations in biodiversity-ecosystem functioning links and identification of separate and synergistic/cumulative human-induced impacts on biodiversity.

Keywords: Squids; Ecological role; Stable isotopes; Trophic level; Bayesian isotopic analyses; Isotopic baseline adjustment; Spatial δ15N gradients

Cephalopods are an important prey resource for fishes, seabirds, and marine mammals, and are also voracious predators on crustaceans, fishes, squid and zooplankton. Because of their high feeding rates and abundance, squids have the potential to exert control on the recruitment of commercially important fishes. In this review, we synthesize the available information for two intrinsic markers (δ15N and δ13C isotopic values) in squids for all oceans and several types of ecosystems to obtain a global view of the trophic niches of squids in marine ecosystems. In particular, we aimed to examine whether the trophic positions and trophic widths of squid species vary among oceans and ecosystem types. To correctly compare across systems, we adjusted squid δ15N values for the isotopic variability of phytoplankton at the base of the food web provided by an ocean circulation-biogeochemistry-isotope model. Studies that focused on the trophic ecology of squids using isotopic techniques were few, and most of the information on squids was from studies on their predators. Our results showed that squids occupy a large range of trophic positions and exploit a large range of trophic resources, reflecting the versatility of their feeding behaviour and confirming conclusions from food-web models. Clear differences in both trophic position and trophic width were found among oceans and ecosystem types. The study also reinforces the importance of considering the natural variation in isotopic values when comparing the isotopic values of consumers inhabiting different ecosystems.

During the past decade, parasites have been considered important components of their ecosystems since they can modify food-web structures and functioning. One constraint to the inclusion of parasites in food-web models is the scarcity of available information on their feeding habits and host–parasite relationships. The stable isotope approach is suggested as a useful methodology to determine the trophic position and feeding habits of parasites. However, the isotopic approach is limited by the lack of information on the isotopic discrimination (ID) values of parasites, which is pivotal to avoiding the biased interpretation of isotopic results. In the present study we aimed to provide the first ID values of δ15N and δ13C between the gyrocotylidean tapeworm Gyrocotyle urna and its definitive host, the holocephalan Chimaera monstrosa. We also test the effect of host body size (body length and body mass) and sex of the host on the ID values. Finally, we illustrate how the trophic relationships of the fish host C. monstrosa and the tapeworm G. urna could vary relative to ID values. Similar to other studies with parasites, the ID values of the parasite–host system were negative for both isotopic values of N (Δδ15N = − 3.33 ± 0.63‰) and C (Δδ13C = − 1.32 ± 0.65‰), independent of the sex and size of the host. By comparing the specific ID obtained here with ID from other studies, we illustrate the importance of using specific ID in parasite–host systems to avoid potential errors in the interpretation of the results when surrogate values from similar systems or organisms are used.

The principle of competitive exclusion postulates that ecologically-similar species are expected to partition their use of resources, leading to niche divergence. The most likely mechanisms allowing such coexistence are considered to be segregation in a horizontal, vertical or temporal dimension, or, where these overlap, a difference in trophic niche. Here, by combining information obtained from tracking devices (geolocator-immersion and time depth recorders), stable isotope analyses of blood, and conventional morphometry, we provide a detailed investigation of the ecological mechanisms that explain the coexistence of four species of abundant, zooplanktivorous seabirds in Southern Ocean ecosystems (blue petrel Halobaena caerulea, Antarctic prion Pachyptila desolata, common diving petrel Pelecanoides urinatrix and South Georgian diving petrel P. georgicus). The results revealed a combination of horizontal, vertical and temporal foraging segregation during the breeding season. The stable isotope and morphological analyses reinforced this conclusion, indicating that each species occupied a distinct trophic space, and that this appears to reflect adaptations in terms of flight performance. In conclusion, the present study indicated that although there was a degree of overlap in some measures of foraging behaviour, overall the four taxa operated in very different ecological space despite breeding in close proximity. We therefore provide important insight into the mechanisms allowing these very large populations of ecologically-similar predators to coexist.

Keywords: Elasmobranchs Benthic rays Feeding habits Foraging ecology Trophic level Mediterranean Sea

The study of trophic ecology of marine predators is crucial to better understand the ecological factors that condition their role within marine ecosystems. Here we investigated the trophic habits and position of a Mediterranean endemic predator, the starry ray, Raja asterias. Specifically, we quantified the diet composition of this endemic ray in a highly exploited area of the NW Mediterranean, and we evaluated the effects of sex, maturity-stage and season on its feeding habits. Our results revealed that the starry ray is a predator of crustaceans (crabs and shrimps), and to a lower extent on teleosts, molluscs and polychaetes. This species has a high trophic position within its food web and feeds mainly on crabs (mainly Liocarcinus depurator and Goneplax rhomboides), independent of their sex, maturity-stage or season. The great importance of crabs in the diet of starry ray may be due to the fact that crabs are the dominant crustaceans in terms of biomass and abundance in the area where starry rays were collected, thus allowing them to exploit the most abundant food resource. Since the starry ray has shown a progressive decline on the catch, further research is needed to analyse the main drivers of starry ray dynamics in the Western Mediterranean Sea. Our results present important new data that will allow us to further explore the population dynamics of starry rays and the role of crustacean availability and fishing activity.

Keywords: Trophic ecology Benthic suspension feeders Hydroids Obelia dichotoma Arctic

Obelia dichotoma is a thecate hydroid with a worldwide distribution, occurring mainly on shallow water hard substrates. Since the trophic ecology of hydroids in polar waters is badly understood, the aim of the present work was to study qualitatively and quantitatively the diet of these organisms in an Arctic environment and to determine their trophic significance. For this purpose, the density of the hydroid population was documented, and simultaneously, zooplankton was sampled in two different years (1997 and 1998). Prey capture rates were estimated by analysing the gastrovascular content of the polyps in a diurnal cycle. Additionally, the digestion time of O. dichotoma was measured by laboratory feeding experiments using diatoms as food items. The analyses of the gastrovascular cavities of the polyps sampled during the diurnal cycles showed that O. dichotoma fed mainly on faecal pellets, organic matter and microalgae. Zooplankton prey was also observed, but gastrovascular contents and zooplankton abundance did not show any correlation in both years. The consumption rates of the hydroid populations differed between the 2 years. It was almost double (8.9 mg Carbon m−2) in 1998 compared to 1997 (5.5 mg Carbon m−2). The significance of the environmental variability in the feeding ecology and population dynamics of hydroids under Arctic conditions is discussed.

Keywords: Deep Sea; Stable Isotopes; Food Web; Benthopelagic Fauna; Environmental Variables; Western Mediterranean

The food-web structure and seasonality of the dominant taxa of benthopelagic megafauna (fishes and decapods) on the middle slope of the Catalan Sea (Balearic Basin, NW Mediterranean) were investigated using the carbon and nitrogen stable isotope ratios of 29 species. Macrofauna (infauna, suprabenthos and zooplankton) were also analysed as potential prey. Samples were collected on a seasonal basis from 600 to 1000 m depth between February 2007 and February 2008. The fishes and decapods were classified into feeding groups based on the literature: benthic feeders (including suprabenthos) and zooplankton feeders, the latter further separated into migratory and non-migratory species. Decapods exhibited depleted δ15N and enriched δ13C compared to fishes. Annual mean δ13C of fishes ranged from − 19.15‰ (Arctozenus risso) to − 16.65‰ (Phycis blennoides) and of δ15N from 7.27‰ (Lampanyctus crocodilus) to 11.31‰ (Nezumia aequalis). Annual mean values of δ13C of decapods were from − 18.94‰ (Sergestes arcticus) to − 14.78‰ (Pontophilus norvegicus), and of δ15N from 6.36‰ (Sergia robusta) to 9.72‰ (Paromola cuvieri). Stable isotopes distinguished well amongst the 3 feeding guilds established a priori, pointing to high levels of resource partitioning in deep-sea communities. The trophic structure of the community was a function of the position of predators along the benthic–pelagic gradient, with benthic feeders isotopically enriched relative to pelagic feeders. This difference allowed the identification of two food webs based on pelagic versus benthic consumption. Prey and predator sizes were also important in structuring the community. The most generalised seasonal pattern was δ13C depletion from winter to spring and summer, especially amongst migratory macroplankton feeders. This suggests greater consumption of pelagic prey, likely related with increases in pelagic production or with ontogenic migrations of organisms from mid-water to the Benthic Boundary Layer (BBL). δ15N enrichment was detected in periods of water column stratification, particularly amongst benthic feeder fishes. Megafauna relied on a single source of nutrition after peaks in surface production, presumably marine snow. Conversely, a larger array of food sources, probably from advection, sustained the community in periods of water column stratification. Benthic feeder δ13C values of both taxa were positively correlated with fluorescence measured 5 m above the seabed and negatively correlated with total organic carbon in the sediments, both being food sources for deposit feeding macroinfauna. Macroplankton feeder δ13C values were linked to environmental variables related to vertical transport from surface production, i.e. lipids and chlorophyll and their degradation products, likely due to their stronger reliance on sinking phytodetritus through consumption of planktonic prey.

The analysis of a compilation of deep CTD casts conducted in the western Mediterranean from 1998 to 2011 has documented the role that dense water formation, and particularly deep dense shelf water cascading off the Gulf of Lions, plays in transporting suspended particulate matter from the coastal regions down to the basin. Deep CTD casts reveal that after the 1999 and 2005–2006 deep cascading events the Western Mediterranean Deep Water (WMDW) was characterized by the presence of a thick bottom nepheloid layer (BNL) that corresponded in thickness with a thermohaline anomaly generated by the mixture of dense waters formed by deep convection in the open sea and by deep cascading. This BNL can be hundreds of meters thick and in the central part of the basin usually exhibits suspended sediment concentrations of <0.1 mg/l above background levels, reaching higher concentrations close to the continental rise, with near-bottom peaks >1 mg/l. After winter 1999 the BNL spread from the Gulf of Lions and the Catalan margin over the northwestern Mediterranean basin, reaching west of the Balearic Islands and the Ligurian Sea, while after winters 2005–2006 the BNL covered the entire western Mediterranean basin. Thickness and concentration of the BNL tend to diminish with time but this trend is highly dependent on the volume of dense water generated, both by convection and cascading. After winter 1999 the BNL signal vanished in one year, but after winters 2005–2006 it lasted for longer and the turbidity signal can still be distinguished at present (2011). Particle size distribution in the BNL reveals the presence of large aggregates up to 1 mm in size formed by a mixture of single particles with the same bimodal grain size distribution as the surface sediments found in the northwestern Mediterranean slope and basin. Results presented in this paper highlight the fact that the WMDW can be periodically affected by the arrival of new dense waters loaded with suspended particles mainly introduced by resuspension processes during major cascading events, being a key process that could ultimately affect deep-sea biogeochemical cycles in the western Mediterranean.

Keywords: Ecological segregation; habitat modelling; migratory behaviour; non-breeding ecology; Pachyptila belcheri ; Pachyptila desolata ; Procellariiformes; resource partitioning;

Pelagic seabirds exploit large areas of ocean when acting as central-place foragers during the breeding season, and ranges are even more extensive outside the breeding period. Spatial niche partitioning is known to occur among species that breed sympatrically, but is less apparent during the non-breeding period when there is increased potential for overlap among closely related species from neighbouring island groups. This applies to several species of prion, Pachyptila spp., in the Southern Ocean; although extremely abundant, their at-sea distribution was virtually unknown because they are difficult to distinguish while at sea. To understand spatial niche partitioning at large scales, we investigated the year-round distribution of thin-billed prions (Pachyptila belcheri) from the Falkland Islands (Islas Malvinas) and Antarctic prions (Pachyptila desolata) from South Georgia.

Keywords: Biologging; Calonectris borealis ; Canary Current; meta-population feeding grounds; seabird at-sea distribution; tracking top predators

Aim Apical pelagic species forage in predictable habitats, and their movements should signal biologically and ecologically significant areas of the marine ecosystem. Several countries are now engaged in identifying these areas based on animal tracking, but this is often limited to a few individuals from one breeding population, which may result in biased portrayals of the key marine habitats. To help identify such foraging areas, we compiled tracking data of a marine top predator from the main breeding colonies in the Central Macaronesia. Location North-east Atlantic Ocean. Methods Over seven years, we tracked the foraging movements of Cory\'s shearwaters (Calonectris borealis) from several populations during the chick-rearing period using global positioning system and platform terminal transmitter devices. Results We obtained foraging trips from 174 shearwaters breeding on six important colonies representative of the range occupied in the Macaronesian Archipelagos of Madeira, Salvages and Canaries. Our results show that birds orient and move rapidly towards the closest neritic waters over the African continental shelf. Birds from different colonies show substantial spatial segregation in their foraging grounds but consistently overlap in some specific foraging areas along the Canary Current characterized by high productivity. By weighting the use of foraging grounds according to the size of each study population, we inferred the overall exploitation of such areas. Main conclusions Our meta-population approach provides a more comprehensive picture of space use from both perspectives: the studied species and the Canary Current system. Foraging grounds consistently used by several populations may not be adequately identified by tracking a single population, and therefore, multiple population tracking studies are needed to properly delineate key conservation areas and inform conservation planning in the marine ecosystem. Finally, we highlight the long-term stability and sustainability of identified foraging areas and propose that countries with geographical jurisdictions over the Canary Current area should work towards multilateral agreements to set management plans for this key marine ecosystem.

Keywords: Cochlodinium polykrikoides; LSU; HAB; Mediterranean Sea; Phylogeny; Biogeography

Although the diversity of dinoflagellates has been intensively studied in several locations in the Mediterranean Sea since the 1950s, it is only during the last two decades that the morphotype of the toxic unarmoured dinoflagellate Cochlodinium polykrikoides Margalef has been detected, coinciding with its apparent worldwide expansion in marine coastal waters. In this study, vegetative cells of C. polykrikoides morphotype from the Catalan coast (NW Mediterranean Sea) were detected and isolated, and the DNA from collected cells was sequenced. While in the Mediterranean Sea, detections are scarce and C. polykrikoides is consistently present at low concentrations, we reported exceptional blooms of this species, in which the maximum abundance reached 2 × 104 cells L−1. Partial LSU rDNA region sequences showed that most C. polykrikoides populations from the Catalan coast formed a new differentiated ribotype, but others were included within the ‘Philippines’ ribotype, demonstrating their coexistence in the Mediterranean Sea. Thus, the current biogeographic nomenclature of the ribotypes is likely to be invalid with respect to the available information from populations comprising the ‘Philippines’ ribotype. The phylogeny suggests the existence of cryptic species that should be evaluated for species-level status. Accordingly, the ribotype determination must be carefully evaluated for all detections and bloom events, since accurate characterization of the morphology, ecophysiology and distribution of the ribotypes are not well resolved.

A new small wave rider called Surpact was developed for air-sea investigations. It was designed to attach to a drifter or a mooring and to float upon the surface waves in order to measure sea state and atmospheric sea level pressure as well as temperature and salinity at a small fixed depth from the surface. Wind speed is derived from Surpact sea state measurements, and the data are calibrated with co-located Special Sensor Microwave Imager Sounder (SSMIS) wind retrievals during a four-month deployment in the North Atlantic subtropics. Individual 15-minute wind estimates present a root mean square difference on the order of 15% with the SSMIS wind retrievals for wind speeds less than 12 m s–1. The wind retrievals might lag the actual wind changes for moderate to strong winds by an hour. This article discusses the accuracy of these wind retrievals based on in situ data collected during the Strasse cruise in August and September 2012. Temperature and salinity data are also examined. The authors find, under some sunny conditions, radiative warming of the temperature probe reduces the accuracy of some of the daytime temperature data and also affects corresponding salinity estimates. Nonetheless, small realistic daily cycles of near-surface salinity (0.01 psu amplitude) were observed. Also, examples of wind time series collected during salinity drops caused by rainfall during late 2012 in the North Atlantic subtropics indicate no intensification of wind during these rain events. - See more at: http://www.tos.org/oceanography/archive/26-1_reverdin.html#sthash.xFTtPM1D.dpuf

Keywords: Marine circulation; Sediment dynamics; Nepheloid layers; Gulf of Valencia; NW Mediterranean

According to previous studies, the surface circulation of the Gulf of Valencia (GoV) is characterized by a convergence between the southwestward Northern Current carrying old Atlantic Waters (oAW) and the northward intrusions of recent Atlantic Waters (rAW) imported through the Ibiza Channel. This paper focuses on the distribution of the suspended sediment concentration in the GoV obtained from a dense grid of CTD observations in June 1995 during the oceanographic cruise MESO\'95 (MESOscale processes). We evaluate the relation between currents, water masses and the nepheloid structure at the time of the survey. Results showed higher suspended sediment concentration (SSC) in the oAW than in the rAW. At the shelf-break depth, an important detachment of particulate matter was observed off Cap La Nao, extending seawards all across the Ibiza Channel. The presence of this intermediate nepheloid layer detachment indicates a preferential off-shelf sediment export at the southern end of the GoV, where the orientation of the continental margin changes, and oAW and rAW merge. On the continental slope, several nepheloid layers detachments were observed between 400 and 600 m, where the Levantine Intermediate Water (LIW) interacts with the seafloor, suggesting the possible presence of internal waves causing sediment resuspension and/or maintaining particles in suspension in the mid-slope region. A bottom nepheloid layer was also observed at deeper locations along the central and southern part of the GoV continental slope, but not at the Ibiza Sill.

Keywords: Mollusca; Spermatophore; Spermatangia; Spermatozoa; Cryopreservation; Flow cytometry

Cephalopod culture is expected to increase in the near future and sperm cryopreservation would be a valuable tool to guarantee sperm availability throughout the year and to improve artificial insemination programs. We have studied the tolerance of spermatophores from the oceanic squid Illex coindetii to several cryoprotectants, in two toxicity experiments and a cryopreservation test. Five permeating cryoprotectants were tested: Dimethyl sulfoxide (Me2SO), methanol, glycerol, propylene glycol and ethylene glycol. In the first experiment, spermatophores were exposed to the five cryoprotectants at 5% (v/v) and 15% (v/v) at 4 °C for 5 min. In the second experiment, spermatophores were exposed to the cryoprotectants at 15% using different exposure times: 5, 15 and 30 min. In a third experiment, we tested two cryopreservation protocols: LN2 vapor or −80 °C freezer, using a 15% cryoprotectant and 15 or 30 min of exposure. Viability and mitochondrial activity were assessed using Mitotracker deep red, YOPRO1 and Hoechst 33342, by flow cytometry. Spermatozoa in this species remain viable after cryoprotectant exposure but their quality decreased considerably after cryopreservation, only 5–10% of spermatozoa being motile. Flow cytometry demonstrated that Me2SO may be the most appropriate cryoprotectant for I. coindetii spermatozoa, and shows a first approach on cephalopod sperm cryopreservation, opening new possibilities for the research and culture of this group of molluscs.

External parental care is uncommon among actiniarians but common in Epiactis species. Here, several aspects of reproduction are analyzed for of one of them, Epiactis georgiana. Samples were collected in December, January, February, March, and April in the Antarctic Peninsula and the eastern Weddell Sea, during 1998, 2000, 2002, and 2003. Most sexually mature individuals of E. georgiana are male or female, but some are hermaphrodites. This is the first report of hermaphroditism in E. georgiana, which is the third species of the genus with this sexual pattern. The results suggest that oogenesis starts in December and that at least two generations of oocytes overlap; a third generation is often brooded externally. Putative fertilization is likely internal, and larvae and/or embryos are externally brooded on the distal part of the adult column until an advanced developmental stage. Apparently E. georgiana reproduces seasonally, probably releasing the embryos/larvae in the last months of the austral spring (December). Inter-individual variability was observed in gametogenesis. In addition, specimens from the Antarctic Peninsula were larger than those from the Weddell Sea. This study represents the first step in understanding the reproductive mode of E. georgiana.

Keywords: CDOM; FDOM; Microbiology; Photochemistry; Mediterranean Sea; Blanes Bay

A harmonic analysis of three years of data collected with fortnight to monthly frequency in the oligotrophic Bay of Blanes (NW Mediterranean) revealed that the water column mixing-stratification cycle dictated the seasonal build-up of the bulk and different coloured fractions of dissolved organic matter (DOM). Dissolved organic carbon (DOC) accumulated at late summer, reaching the annual maximum by early September, half a month later than water temperature. The seasonal cycle of the protein-like fluorescence (F(280/350)) was in phase with DOC, suggesting that reduced heterotrophic activity, due to severe P limitation, is likely the reason behind the late summer accumulation of these materials. The absorption due to conjugated carbon double bonds of DOM (aCDOM(254)) reached the annual maximum by early August, concomitant to the seasonal maximum of microbial activity, suggesting that biological production prevailed over photo-degradation of these compounds. On the contrary, the fluorescence of humic-like substances absorbing in the UV-A region (F(340/440)) presented the annual maximum in early February, coinciding with the seasonal maximum of autotrophic biomass, and the minimum in early August, because of the prevalence of photo-degradation over microbial production. The optical properties of DOM allowed distinguishing between three DOC pools of contrasting origin, photo- and bio-reactivity, in the oligotrophic NW Mediterranean Sea.

Keywords: Maja brachydactyla ; broodstock; bacteria; haemolymph metabolites; digestive and metabolic enzymes; stress biomarkers

Adults from spider crab, Maja brachydactyla, Balss, 1922 were kept in captivity for up to 2 years. Haemolymph of ten females was extracted monthly for monitoring several metabolites and the presence of Vibrionacea bacteria. A neurotoxic marker and hepatic metabolic and digestive enzyme capacities were contrasted between wild specimens and those reared in captivity. As a result, no differences were observed in hepatosomatic index (HSI) between males and females, but captive animals presented lower HSI than the wild ones. After 2 years of confinement, no changes in quantities of haemolymph microflora and metabolites were observed and this was considered indicative of adaptation of the broodstock to confinement. Spider crab also showed a large plasticity in their hepatopancreatic digestive capabilities suggested by the adaptation to the food supplied in captivity. Moreover, captivity conditions did not seem to negatively alter their antioxidant defences, xenobiotic capacity or neuromuscular activity, as no enhanced oxidative stress damage was shown in either males or females. These results indicate that although the confinement conditions used in this study do not mimic those from the wild, they could be considered as adequate for rearing M. brachydactyla in captivity, at least with regard to the set of parameters assessed.

Keywords: Engraulis encrasicolus; Sardinella aurita; Larvae; Circulation; Eddies; Mediterranean

In recent years a northward expansion of Sardinella aurita has been reported in the Western Mediterranean. Spawning of this species takes place in summer coinciding with Engraulis encrasicolus, the dominant species in the region. Since both species inhabit the continental shelf, their larvae coexist during this period of the year. The circulation in the region is characterized by the Northern current, flowing along the continental slope. This current displays strong mesoscale activity presenting a meandering path and series of anticyclonic eddies over the shelf. These eddies are fed from offshore by the Northern current and by coastal waters from inshore thus merging and concentrating water from their both sides. The study analyses the role of mesoscale eddies shaping the distribution of S. aurita and E. encrasicolus larvae along the Catalan coast. Data covering the whole shelf and slope were obtained in 3 oceanographic cruises conducted in the summers of 2003 and 2004. E. encrasicolus larvae were found scattered on the whole continental shelf being particularly abundant over the shelf break and in the northern third of the region, associated with the intrusion of the Northern current. S. aurita larvae showed a more coastal distribution, being almost absent at the shelf break and under the influence of the Northern current. The observed spatial distribution of larval sizes evidenced the spawning preferences of each species and the transport and concentration of larvae of both species inside the eddies, as they entrain water from its two sides. This behaviour helps to ensure better survival conditions due to higher food availability brought from the offshore side but in an environment without dispersion.

Keywords: Arctic; Fram Strait; Spitsbergen; Greenland; Zooplankton; Copepod; Feeding; Diet; Vertical distribution; Phaeocystis; ZooImage

In early summer 2007 we determined the vertical distribution of mesozooplankton (>200 μm) and assessed the copepod feeding rates in 19 stations distributed along the East Greenland Current and the Fram Strait. The study coincided with a bloom of the haptophyte Phaeocystis pouchetii in the colonial form. Copepods dominated the zooplankton community numerically, and were mainly distributed within the upper 150 m (except for Metridia longa and Oithona spp., that inhabited deeper waters), without showing a clear avoidance of the P. pouchetii layer. Copepod diet was diverse, ciliates having a relevant share (40% of the diet). Copepods also displayed active grazing upon the colonies of P. pouchetii. In general, feeding rates were low (on average, daily ration was 1.6% of body carbon), likely due to the scarcity of nano and microplankton during the study (<100 μg C L−1). Consequently, the trophic impacts on both the nano- and microplankton standing stocks and on primary production were negligible. These results suggest that during the period of study the transfer of carbon and energy from lower trophic levels towards copepods was low.

Settling particles were collected by an array of sediment trap moorings deployed along the Cap de Creus (CCC) and Lacaze-Duthiers (LDC) submarine canyons and on the adjacent southern open slope (SOS) between October 2005 and October 2006. This array collected particles during common settling processes and particles transferred to deep waters by dense shelf water cascading (DSWC). Polychlorobiphenyls (PCBs), dichlorodiphenyltrichloroethane and its metabolites (DDTs), chlorobenzenes (CBzs)—pentachlorobenzene and hexachlorobenzene—and hexachlorocyclohexanes were analyzed in all samples. The results show much higher settling fluxes of these compounds during DSWC than during common sedimentation processes. The area of highest deposition was located between 1000 and 1500 m depth and extended along the canyons and outside them showing their channelling effects but also overflows of dense shelf water from these canyons. Higher fluxes were observed near the bottom (30 m above bottom; mab) than at intermediate waters (500 mab) which is consistent with the formation and sinking of dense water close to the continental shelf and main displacement through the slope by the bottom. DSWC involved the highest settling fluxes of these compounds ever described in marine continental slopes and pelagic areas, e.g., peak values of PCBs (960 ng·m–2·d–1), DDTs (2900 ng·m–2·d–1), CBzs (340 ng·m–2·d–1) and lindane (180 ng·m–2·d–1).

Keywords: Alexandrium species; Biodiversity; Dinoflagellates; Estuaries; HABs; Mediterranean Sea; Resting cysts

The composition and assemblages of living dinoflagellate cysts from two estuarine bays (Alfacs and Fangar bays) in the northwestern Mediterranean Sea were investigated, focusing on the presence and distribution of harmful species. Sediment cores were taken from 10 stations in Alfacs Bay and from 6 stations in Fangar Bay. Sediment samples from the surface (the top 1 cm) and the subsurface profile (from 2 to 5 cm depth) in selected stations, were analyzed. Sixty-two morphotypes were recovered, some of which are new reports for the northwestern Mediterranean area. Few morphotypes dominated in terms of abundance and relative percentage (e.g. the Scrippsiella trochoidea complex was the dominant and most widely distributed morphotype in each bay, reaching maxima of 163 cysts cm−3 wet sediment (ws) and 102 cysts cm−3 ws in Alfacs and Fangar bays, respectively). The assemblage in Alfacs Bay was also characterized by the presence of Biecheleria cincta (maximum 116 cysts cm−3 ws), whereas the occurrence of Pentapharsodinium tyrrhenicum (maximum 37 cysts cm−3 ws) was greater in Fangar Bay. Twelve morphotypes belonging to potentially toxic or noxious species were detected, with the genus Alexandrium dominating. Among the harmful species, Gymnodinium litoralis and Vulcanodinium rugosum are reported for the first time from the study areas. Furthermore, cysts of the high biomass bloom-forming species Kryptoperidinium foliaceum are reported for the first time in the Mediterranean Sea. All the harmful species, with the exception of Alexandrium minutum, showed greatest abundances in subsurface samples. Profile analysis led to the description of a new cyst morphotype belonging to the Alexandrium genus (presumably A. insuetum). Our results provide information on the presence of harmful species in the studied bays, confirming the usefulness of cyst analysis in assessment of the potential risk of harmful blooms in aquaculture areas.

The long-term monitoring of basic hydrological parameters (temperature and salinity), collected as time series with adequate temporal resolution (i.e. with a sampling interval allowing the resolution of all important timescales) in key places of the Mediterranean Sea (straits and channels, zones of dense water formation, deep parts of the basins), constitute a priority in the context of global changes. This led CIESM (The Mediterranean Science Commission) to support, since 2002, the HYDROCHANGES programme (www.ciesm.org/marine/programs/hydrochanges.htm), a network of autonomous conductivity, temperature, and depth (CTD) sensors, deployed on mainly short and easily manageable subsurface moorings, within the core of a certain water mass. The HYDROCHANGES strategy is twofold and develops on different scales. To get information about long-term changes of hydrological characteristics, long time series are needed. But before these series are long enough they allow the detection of links between them at shorter timescales that may provide extremely valuable information about the functioning of the Mediterranean Sea. The aim of this paper is to present the history of the programme and the current set-up of the network (monitored sites, involved groups) as well as to provide for the first time an overview of all the time series collected under the HYDROCHANGES umbrella, discussing the results obtained thanks to the programme.

The hermatypic coral Oculina patagonica can drive a compositional shift in shallow water benthic marine communities in the northwestern Mediterranean. Here, we analyze a long-term, large-scale observational dataset to characterize the dynamics of the species’ recent northward range shift along the coast of Catalonia and examine the main factors that could have influenced this spread. The variation in the distributional range of Oculina patagonica was examined by monitoring 223 locations including natural and artificial habitats along .400 km of coastline over the last 19 years (1992–2010). Abundance of the species increased from being present in one location in 1992 to occur on 19% of the locations in 2010, and exhibited an acceleration of its spreading over time driven by the join action of neighborhood and long-distance dispersal. However, the pattern of spread diverged between artificial and natural habitats. A short lag phase and a high slope on the exponential phase characterized the temporal pattern of spread on artificial habitats in contrast to that observed on natural ones. Northward expansion has occurred at the fastest rate (22 km year21) reported for a coral species thus far, which is sufficiently fast to cope with certain climate warming predictions. The pattern of spread suggests that this process is mediated by the interplay of (i) the availability of open space provided by artificial habitats, (ii) the seawater temperature increase with the subsequent extension of the growth period, and (iii) the particular biological features of O. patagonica (current high growth rates, early reproduction, and survival to low temperature and in polluted areas). These results are indicative of an ongoing fundamental modification of temperate shallow water assemblages, which is consistent with the predictions indicating that the Mediterranean Sea is one of the most sensitive regions to global change.

Keywords: Seawater; Biofiltration; Inorganic nitrogen; Biodegradable organic carbon

Biofilters degrade a small fraction of the natural organic matter (NOM) contained in seawater which is the leading cause of biofouling in downstream processes. This work studies the effects of chemical additions on NOM biodegradation by biofilters. In this work, biofiltration of seawater with an empty bed contact time (EBCT) of 6 min and a hydraulic loading rate of 10 m h−1 reduces the biological oxygen demand (BOD7) by 8%, the dissolved organic carbon (DOC) by 6% and the UV absorbance at 254 nm (A254) by 7%. Different amounts of ammonium chloride are added to the seawater (up to twice the total dissolved nitrogen in untreated seawater) to study its possible effect on the removal of NOM by a pilot-scale biofilter. Seawater is amended with different amounts of easily biodegradable dissolved organic carbon (BDOC) supplied as sodium acetate (up to twice the DOC) for the same purpose. The results of this work reveal that the ammonium chloride additions do not significantly affect NOM removal and the sodium acetate is completely consumed by the biofiltration process. For both types of chemical additions, the BOD7, DOC and A254 in the outlet stream of the biofilter are similar to the values for the untreated control. These results indicate that this biofilter easily removes the BDOC from the seawater when the EBCT is not above 6 min. Furthermore, nitrogen does not limit the NOM biodegradation in seawater under these experimental conditions.

Keywords: Sediment pollution; Persistent organic pollutants; NW Mediterranean; Benthic sole fish; Biomarkers

Sediment polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), organochlorinated pesticides (OCls) and polybrominated diphenyl ethers (PBDEs) were measured during winter 2011 at seven sites on the Catalan coast (NW Mediterranean). Also at these sites, the benthic fish Solea solea and Solea senegalensis were fished for biomarker analysis. Chemical concentrations did not exceed the values considered safe by sediment quality guidelines (SQGs) for PAHs. However, levels of DDT (94.5 ng/g d.w.) and PCBs (15.1 ng/g d.w.) were significant in the Ebre Delta. Nonspecific immune parameters in S. solea showed a positive correlation between lysozyme activity in plasma and PAH content in sediment (r = 0.982, p < 0.01) and the opposite trend occurred with the complement test (ACH50) (r = −0.837; p < 0.05). Cell counts (monocytes, lymphocytes and granulocytes) were elevated at most PAH-affected sites. A high concentration of bile FACs (fluorescent aromatic compounds) occurred at the northern station.

Keywords: Deep sea; Ecopath with Ecosim; Modelling; Food web; Trawl fishery; NW Mediterranean

There is increasing fishing pressure on the continental margins of the oceans, and this raises concerns about the vulnerability of the ecosystems thriving there. The current knowledge of the biology of deep-water fish species identifies potential reduced resilience to anthropogenic disturbance. However, there are extreme difficulties in sampling the deep sea, resulting in poorly resolved and indirectly obtained food-web relationships. Here, we modelled the flows and biomasses of a Mediterranean deep-sea ecosystem, the Catalan Sea continental slope at depths of 1000–1400 m. This is the first model of a deep-water ecosystem in the Mediterranean Sea. The objectives were to (a) quantitatively describe the food web structure of the ecosystem, (b) examine the role of key species in the ecosystem, and (c) explore the vulnerability of this deep-sea ecosystem to potential future fishing exploitation. We used the Ecopath with Ecosim (EwE) modelling approach and software to model the ecosystem. The trophic model included 18 consumers, a marine snow group, and a sediment detritus group. Trophic network analysis identified low levels of consumer biomass cycling and low system omnivory index when compared with expected values of marine ecosystems, and higher cycling and omnivory when compared with available EwE models of shallower areas of the Mediterranean Sea. The majority of flows in the ecosystem were concentrated at the trophic level of first-order consumers (TL 2). Benthic invertebrates and demersal sharks were identified to have key ecological roles in the ecosystem. We used the dynamic temporal model Ecosim to simulate expansion of the red-shrimp benthic trawl fishery that currently operates at shallower depths, down to 800 m depth. The simulations showed reductions in fish biomass and that the state of the deep continental slope ecosystem in the western Mediterranean seems to be the result of a long-term succession process, which has reached ecological stability, and is particularly vulnerable to human impact and, specifically, to fisheries exploitation.

Alguns autors, i fins i tot poders públics, reconeixen el paper de la crisi energètica que s'està desenvolupant com una de les claus de la present crisi econòmica i financera, i particularment de la seva durada. Tot i això, les polítiques que s'intenten promoure des de les institucions públiques posen l'accent en els aspectes merament energètics del problema, promovent mesures com ara l’estalvi o l'eficàcia, sense tenir en compte la forta interacció d'aquestes mesures amb el sector productiu i els seus efectes indesitjables. En realitat, la crisi energètica no és res més que un altre símptoma d'una crisi global i holística. En aquest sentit, les entitats locals estan cridades a exercir un paper clau, tota vegada que un dels efectes secundaris de la crisi energètica és la desglobalització o relocalització.

Experiments to determine egg production and feeding rates of Oithona davisae were carried out under controlled laboratory conditions. From copepodite IV stage on, the animals were fed the heterotrophic dinoflagellate Oxyrrhis marina in a wide range of concentrations (from 10 µg C L−1to 286 µg C L−1), and adult females were daily monitored to study different aspects of their fecundity. Both clutch and egg-production rate increased with food concentration, with values from 8 to 20 eggs for the clutch size, and from 1.8 eggs to 6.3 eggs female−1 d−1 for the egg production. In addition, to assess the efficiency of conversion of food intake into egg mass, two feeding experiments were conducted. Maximum weight-specific ingestion rates (≈ 80% body C d−1) and the egg-production efficiency (16%) were lower than those reported for free-spawning calanoid copepods. The fact that satiating food concentrations for feeding and egg production of adult females of Oithona davisae were rather low suggests an adaptation to exploit oligotrophic environments, and might explain the ecological success of the genus in situations when food becomes limiting for other groups of copepods.