Research group

Biology of Reproduction and Environmental Epigenetics

We investigate internal and environmental factors regulating fish reproduction

Our main research lines are:

1. Determination and differentiation of sex in fish and its control in aquaculture

Using transcriptomics and epigenomics, we study genetic, epigenetic and environmental influences (especially temperature) on sex determination and differentiation in fish. Our studies are the basis for the development of protocols for sex ratio control and ploidy in aquaculture.

2. Large-scale studies on the evolution of sexual systems in fish

We have compiled a database on the sexual systems (separate sex and different forms of hermaphroditism) and key life history traits of more than 4,600 fish species from around the world. We study the incidence, distribution, influence of abiotic factors and the evolutionary transitions between these sexual systems.

3. Environmental epigenetics: sex regulation, domestication, epigenetic clocks, biomarkers

Environmental epigenetics investigates how external factors can result in heritable changes in gene expression without altering the DNA sequence. We study epigenetic changes to solve specific problems, including the relationship between temperature and sex ratios, and have patented a sex predictor. We also study the establishment and change of epigenetic marks, having developed the world's first epigenetic clock to estimate the age of fish. We reveal the key role of epigenetic modifications during the initial stages of animal domestication, thus contributing to a better understanding of Darwin's "domestication syndrome." Currently, we are interested in epigenetic mechanisms during early development that regulate genes important for key phenotypic traits.

Most relevant information

    Destacats

    Publication in 2019 of the book "Sex Control in Aquaculture" (Wiley-Blackwell; SBN: 978-1-119-12726-0), considered one of the best aquaculture books of all time by Bookauthority.com

    Publication in 2023 of the 20-chapter book “Epigenetics in Aquaculture” (Wiley; ISBN: 978-1-119-82191-5).

    The group is involved in various outreach activities. Its work has been reported on radio, television, newspapers and magazines in different countries (The Globe and Mail, National Geographic, CNN, Time).

    The group collaborates or has collaborated with the main aquaculture companies in Spain and some abroad, and has developed the world's first epigenetic clock in fish.

    Francesc Piferrer received the Jacumar prize for the best research in aquaculture in 2013, awarded by the Ministry of Agriculture, Fisheries and Food.

    Núria Sánchez, a PhD student of the group until 2023, won one of the 10 final prizes of the "I do research, I am CSIC" competition in the 2019 edition.

    Francesc Piferrer was elected member of the Royal Academy of Sciences and Arts of Barcelona in 2019 and received the 2020 Research Award from the College of Biologists of Catalonia, in recognition of his contributions in the field of reproductive biology and epigenetics of fish.
     

    Publicacions
    • Sánchez Baizán, Núria; Jarne-Sanz, Ignasi; Roco, Álvaro S.; Schartl, Manfred; Piferrer, Francesc;
      2024

      Extraordinary variability in gene activation and repression programs during gonadal sex differentiation across vertebrates

      10.3389/fcell.2024.1328365
    • Piferrer, Francesc; Anastasiadi, Dafni;
      2023

      Age estimation in fishes using epigenetic clocks: Applications to fisheries management and conservation biology

      10.3389/fmars.2023.1062151
    • Valdivieso, Alejandro; Sánchez Baizán, Núria; Mitrizakis, Nikos; Papandroulakis, Nikos; Piferrer, Francesc;
      2023

      Development of epigenetic biomarkers with diagnostic and prognostic value to assess the lasting effects of early temperature changes in farmed fish

      10.1016/j.aquaculture.2022.738918
    • Pla Quirante, Susanna; Benvenuto, Chiara; Capellini, Isabella; Piferrer, Francesc;
      2022

      Switches, stability and reversals in the evolutionary history of sexual systems in fish

      10.1038/s41467-022-30419-z
    • Geffroy, Benjamin; Besson, Mathieu; Sánchez Baizán, Núria; Clota, Frederic; Goikoetxea, Alexander; Sadoul, Bastien; Ruelle, François; Blanc, Marie-Odile; Parrinello, Hugues; Hermet, Sophie; Blondeau-Bidet, Eva; Pratlong, Marine; Piferrer, Francesc; Vandeputte, Marc; Allal, François;
      2021

      Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system

      10.1073/pnas.2112660118
    Projectes
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